A2B2C - SoiBio

XIII CAB2C, XIII SoIBio, III RiaBio - 2023

Abstract Submission for talks and posters

Oral presentations in English

30th Oct – 3rd Nov 2023

1st - 3rd Nov 2023
ECU-UNR
St San Martín 750
Rosario, Argentina

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Adhere to the event

Program

Day 1
Day 2
Day 3

09:00 to 09:20

Opening of the congress

Flavio E. Spetale : Responsible for the organizing committee

Sandra Fernández : Director of the CCT CONICET Rosario

Diego Moreno : Coordinator of the Area of Science, Technology and Innovation for Development of the UNR

Marina Baima : Secretary of Science, Technology and Innovation of the Ministry of Production of Santa Fe
TRACK: Proteomics, Protein Structure, and Function
09:20 to 10:00

Gustavo Parisi

UNQ - CONICET, Argentina

Ghost interactions: revealing missing protein-ligand interactions using Alphafold predictions
10:00 to 10:30

Coffee break
10:30 to 10:45

Matias Safranchik

IIB-UNSAM, Argentina

Comprehensive analysis of the pocket protein family interactions mediated by Short Linear Motifs
10:45 to 11:00

Franco Cuccovia Warletk

UNQ, Argentina

Functional characterization of baculoviral proteins with nuclear localization
11:00 to 11:15

Josefa Nuñez-Belmar

UMAYOR, Chile

New Bioinformatic Approaches in the Study of the Adhesive Fimbrial Systems (FimA) of the Human Oral Pathogen Porphyromonas gingivalis
11:15 to 11:30

Maribel Hernandez Rosales

CINVESTAV, Mexico

Cellular Stress Response Mechanisms during Regeneration in Deroceras laeve: An Evolutionary Perspective
11:30 to 11:45

Luis Tataje Lavanda

UPSJB, Peru

Integrating Machine Learning for Enhanced Epitope Discovery and Vaccine Development in Avian Viral Pathogens
11:345 to 12:00

Sofia Rodriguez

UMAYOR, Chile

Analysis of regulatory networks based on single cell transcriptomics reveals Key Regulators in Rett Syndrome
12:00 to 13:30

Lunch
TRACK: Evolutionary, Comparative and Population Genomics
13:30 to 13:45

Mauro Ibañez

UNER, Argentina

Unraveling Key Features of Microbial Alpha Diversity Metrics and Their Practical Applications
13:45 to 14:00

José Gaete-Loyola

UMAYOR, Chile

Identification of microRNA families and their target genes involved dormancy stages into sweet cherry cultivars with contrasting chilling requirements
14:00 to 14:15

Mariano Elean

CERELA, Argentina

Genomic overview of Proteolytic Enzymes in Lactobacillus delbrueckii: Implications for Dairy Fermentation
14:15 to 14:30

Franco Fernandez

CIAP-INTA, Argentina

Genomic approach to delimiting species boundaries in the phytopathogenic bacteria phytoplasmas: analysis of the X-disease clade
14:30 to 14:45

Marisol Navarro Mirandaz

CINVESTAV, Mexico

Modeling Microbial Competitive Interactions using Biosynthetic Gene Clusters (BGCs) and Network Features
14:45 to 15:00

Gabriel Krüger

UNAB, Chile

A genomic and artificial intelligence approach: adaptation and resistance of Salmonella in the poultry industry
15:00 to 15:30

Coffee break
15:30 to 17:00

POSTER SESSION I
17:00 to 17:40

Alejandra Cervera Taboada

INMEGEN, Mexico

Analysis of human RNA-seq data from cardiac sarcoidosis, lymphocytic, and giant cell subtypes reveals novel insights into molecular mechanisms of myocarditis

09:00 to 09:20

RIABIO Session Welcome
TRACK: Machine Learning in Computational, Systems Biology and Bioinformatics
09:20 to 10:00

Ignacio Ponzoni

ICIC - CONICET, Argentina

Explainable Artificial Intelligence: guidelines for its application to Drug Discovery
10:00 to 10:30

Coffee break
10:30 to 10:45

Arlen Mosquera

PUJ, Colombia

Transposable elements classification using recurrent neural network
10:45 to 11:00

Matias Gerard

Sinc(i)-UNL-CONICET,
Argentina

A novel approach for RNA folding inference based on message-passing graph neural networks
11:00 to 11:15

Ignacio Garcia Labari

CIFASIS-CONICET,
Argentina

A music-inspired codification of ncRNAs with pseudoknots
11:15 to 11:30

Javier Sanchez-Galan

UTP, Panama

Improvements in Recurrent Neural Networks for the Prediction of Molecular Properties and Characteristics of Natural Products
11:30 to 11:45

Leandro Bugnon

Sinc(i)-UNL-CONICET,
Argentina

SincFold: a new tool for RNA folding based on deep learning
11:45 to 12:00

Paola Sosa Basso

FCIEN, Uruguay

Bioinformatics Analysis of lncRNAs in Kinetoplastid Parasites
12:00 to 13:30

Lunch
TRACK: Companies and startups bio-agro
13:30 to 13:45

Maria Laura Orcellet

SF-500, Argentina

How to create a science-based company?
13:45 to 14:00

Fernando Johann

Tell, Argentina

Language as a window to the early diagnosis of neurodegenerative diseases
14:00 to 14:15

Cristian Rohr

Heritas, Argentina

Heritas: Data challenges
14:15 to 14:30

Alfredo Garcia

Syngenta Agro,
Argentina

Technology applied to agriculture: a solution to produce more and better
14:30 to 14:45

Iván Regali

DeepAgro, Argentina

Artificial Intelligence applied to agriculture
14:45 to 15:00

Eugenia Colomar

IRAM, Argentina

What's behind a product?
15:00 to 15:30

Coffee break
15:30 to 17:00

POSTER SESSION II
17:00 to 17:40

Javier de Las Rivas

CiC-IBMCC,
España

Bioinformatics & Machine Learning to analyse transcriptomic and clinical data from cancer patients
21:00

SOCIAL DINNER (Miranda Room - Ros Tower hotel)

09:00 to 09:20

Morning Welcome
TRACK: Genomics, Transcriptomics, and Metagenomic
09:20 to 10:00

Patricia Saragüeta

IIBYME-CONICET,
Argentina

3D organization of the endometrial genome
10:00 to 10:30

Coffee break
10:30 to 10:45

Kesia Barrows

UTP, Panama

Comparison of bioinformatics tools for de novo genome assembly of Setophoma (Phaeosphaeriaceae), a genus isolated as an endophyte of Coffea arabica
10:45 to 11:00

Sabrina Costa-Tártara

UNLU, Argentina

Identification of regulatory motifs in putative coding genes of small Heat Shock Proteins in Chenopodium quinoa
11:00 to 11:15

Agustin Baricalla

CONICET, Argentina

Transcriptomic meta-analysis to elucidate the presence and expression of neuropeptides in insect embryos
11:15 to 11:30

Danitza Silva García

UMAYOR, Chile

Transcriptomic exploration of dormancy mechanisms in sweet cherry varieties with contrasting cold requirements, under equitable agricultural conditions
11:30 to 11:45

Katia Avina Padilla

CINVESTAV, Mexico

Understanding tomato Host Response to PSTVd-Infection: Insights from Network Analysis and Transcriptional Reprogramming
11:45 to 12:00

Santiago Prochetto

CONICET, Argentina

evolSOM: A Novel R Package for evolutionary conservation analysis using Self-Organizing Maps
12:00 to 13:30

Lunch
TRACK: Biomedical Omics, Biological databases and Bioimaging
13:30 to 14:15

Patricio Yankilevich

IBIOBA- MPSP-CONICET,
Argentina

From data to diagnosis and treatment: An NGS data analysis pipeline
14:15 to 14:30

Coffee break
14:30 to 14:45

Natalia Alonso-Moreda

CiC-IBMCC, España

Computational modeling and prediction of survival in breast cancer tumors based on myelo-lymphocyte ratios and hot-cold scores
14:45 to 15:00

Luciano Anselmino

CONICET, Argentina

Deciphering pharmacological targets via computational analysis for drug repositioning in treating 5-FU-resistant colorectal cancer
15:00 to 15:15

Luciana Ant

IByME, Argentina

Comparing cistromes from endometrial adenocarcinoma cell line and endometrial tumor samples
15:15 to 15:30

Alexander
Mulet de los Reyes

UBA, Argentina

GBManalizerApp: A CAD tool for the three-dimensional automatic segmentation of the glioblastoma multiforme
15:30 to 15:45

Humberto Debat

INTA, Argentina

A Decade of Viral Exploration through High-Throughput Sequencing Data: Insights from the Global South
15:45 to 16:00

Juan Zuñiga-Umaña

CENAT, Costa Rica

Development of an automated system for determination of ultrastructural patterns in spores of pathogens and symbionts of agricultural relevance
16:00 to 16:30

Poster and Best Talk Prizes A2B2C SoIBio Closing Ceremonies